Find the nearest neighbors
FindNNDist(fullcluster, normCount, meaningn = 20)A list of clusters that generated by the function GetCluster().
A list of normalized gene count matrix generated by the function NormData().
default to be 20
A list of distance vectors
data(sim_result)
# Create example data for fullcluster (mock data)
# fullcluster <- GetCluster(seuratlist)
# Create example data for normCount (mock data)
# normCount <- NormData(seuratlist)
# Define meaningn
meaningn <- 20
FindNNDist(sim_result[[1]], sim_result[[2]], meaningn = meaningn)
#>
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|============================================================| 100%
#> $`sample-1`
#> $`sample-1`[[1]]
#> $`sample-1`[[1]]$`Cluster-1-dist1`
#> $`sample-1`[[1]]$`Cluster-1-dist1`[[1]]
#> GCCAACCTTTTCAC-1 AGAGCGGAGTCCTC-1 TCATGTACTGCTGA-1 TAAATGTGGTTGGT-1
#> 0.4168781 0.4215551 0.4333821 0.4401978
#> AGAACGCTAAGGGC-1 TATACAGATCCTAT-1 ATTTGCACCTATGG-1 ATACCTACGTACGT-1
#> 0.4411233 0.4424682 0.4488208 0.4528544
#> CAATATGATGGTGT-1 TAGTACCTACCTTT-1 AGTTTCACAGAATG-1 AAATTCGATCAGTG-1
#> 0.4536055 0.4539784 0.4552600 0.4606758
#> CTTAAAGATGACAC-1 AATAGGGAGAGCTT-1 TCCCATCTTTCGCC-1 GAACCAACCATGAC-1
#> 0.4631657 0.4633491 0.4697549 0.4720871
#> TACTCTGAGTCTTT-1 TACGTTACGGACGA-1 TATACAGATTGACG-1 GAAGCTTGATTCTC-1
#> 0.4727638 0.4754392 0.4772885 0.4784777
#>
#>
#> $`sample-1`[[1]]$`Cluster-2-dist1`
#> $`sample-1`[[1]]$`Cluster-2-dist1`[[1]]
#> ACTATCACCACTAG-1 CGATCCACTGGCAT-1 CTCGCATGAGAATG-1 CTTAAAGATGACAC-1
#> 0.4599904 0.4807713 0.4859972 0.4898388
#> CGATACGAGTAGGG-1 TATGTGCTAACGAA-1 GCCAACCTTTTCAC-1 CGAAGACTACCATG-1
#> 0.4935778 0.4997122 0.5007467 0.5061022
#> ATTGGGTGGCTCCT-1 AGTGAAGAGAGAGC-1 TATACAGATTGACG-1 TACGTTACGGACGA-1
#> 0.5081902 0.5121016 0.5133797 0.5142443
#> ACTTGACTCACCAA-1 AGCGGCTGCCGTTC-1 TGCAAGACCTCCCA-1 ATGAAGGAACTCTT-1
#> 0.5170036 0.5192142 0.5232809 0.5240128
#> CAATATGATGGTGT-1 TGAACCGATGGAAA-1 CTTTGATGAAGGTA-1 GCAGCTCTAGCATC-1
#> 0.5261657 0.5269322 0.5273094 0.5278297
#>
#>
#> $`sample-1`[[1]]$`Cluster-3-dist1`
#> $`sample-1`[[1]]$`Cluster-3-dist1`[[1]]
#> ATTGAATGTCGTGA-1 ATACCTACGTACGT-1 CTGACCACAGTCGT-1 AGAACAGATGGAGG-1
#> 0.3620963 0.3866080 0.3944249 0.3986115
#> AACAGCACCTCGCT-1 TAATCCACCTCAGA-1 CGCACTACACTACG-1 AAACGGCTTGTCAG-1
#> 0.4050980 0.4152952 0.4250580 0.4270574
#> GCCAACCTTTTCAC-1 TCACCTCTTTACTC-1 GGGTTATGGTTCGA-1 CTTTGATGAAGGTA-1
#> 0.4307117 0.4349739 0.4359791 0.4368478
#> TACTCTGAGTCTTT-1 ACACGTGAAGTCAC-1 TCGGCACTCCAAGT-1 ATTTGCACCTATGG-1
#> 0.4450020 0.4462582 0.4473503 0.4514155
#> ACCGAAACTGACCA-1 TAACTAGAACGGAG-1 ACATACCTAGAATG-1 TTCACAACCTAGCA-1
#> 0.4548215 0.4628485 0.4654928 0.4666477
#>
#>
#> $`sample-1`[[1]]$`Cluster-4-dist1`
#> $`sample-1`[[1]]$`Cluster-4-dist1`[[1]]
#> CACCGTACCTGATG-1 CGATACGAGTAGGG-1 ACTTGACTCACCAA-1 CTTAAAGATGACAC-1
#> 0.4210493 0.4226300 0.4339561 0.4395891
#> CAATATGATGGTGT-1 TACGCAGAGCCCTT-1 ATGTCACTCGATAC-1 ACCTGAGACCTATT-1
#> 0.4480610 0.4528170 0.4607824 0.4661475
#> GTAATAACTGTCCC-1 CTGCAGCTTCTTAC-1 TGAACCGATGGAAA-1 CGATCCACTGGCAT-1
#> 0.4677114 0.4684416 0.4721682 0.4730187
#> AATAGGGAGAGCTT-1 GTCACAGAGAGACG-1 TCTAACTGCTGAAC-1 TACTCTGAGTCTTT-1
#> 0.4749907 0.4782087 0.4792429 0.4796281
#> TCGAATCTGAACCT-1 CGAAGACTACCATG-1 TAGGTCGAACCCTC-1 AGTGAAGAGAGAGC-1
#> 0.4822638 0.4833109 0.4838850 0.4866095
#>
#>
#> $`sample-1`[[1]]$`Cluster-5-dist1`
#> $`sample-1`[[1]]$`Cluster-5-dist1`[[1]]
#> CCAATGGAAAAGCA-1 TGCAAGACCTCCCA-1 TAGTACCTACCTTT-1 CTGCAGCTTCTTAC-1
#> 0.3278194 0.3604714 0.3605006 0.3621706
#> GCCTGACTCAACCA-1 ATATAGTGTAAGCC-1 CGTCCATGCAGAAA-1 AGAGCGGAGTCCTC-1
#> 0.3654373 0.3654696 0.3655998 0.3699514
#> TACTCTGAGTCTTT-1 CGATCCACTGGCAT-1 TAGGTTCTCAGTTG-1 AGTGAAGAGAGAGC-1
#> 0.3727114 0.3752159 0.3753730 0.3769974
#> ATTTCTCTGGACAG-1 TGTGAGTGCTTCGC-1 TCGGCACTCCAAGT-1 TTGTCATGTGCACA-1
#> 0.3774480 0.3796217 0.3817795 0.3825988
#> GGTGATACGATAAG-1 TAAAGACTGGGAGT-1 ATACTCTGAACCAC-1 TCTAACTGCTGAAC-1
#> 0.3837904 0.3851200 0.3868061 0.3919519
#>
#>
#>
#> $`sample-1`[[2]]
#> $`sample-1`[[2]]$`Cluster-1-dist2`
#> $`sample-1`[[2]]$`Cluster-1-dist2`[[1]]
#> CAGTGATGGGGTGA-1 TGACACGACTGACA-1 AGCTTTACTTACCT-1 ACTCCTCTCCACAA-1
#> 0.4771121 0.5059837 0.5092528 0.5164490
#> TGAATAACGAATGA-1 ACTACTACGTGTAC-1 GGAGAGACCCTAAG-1 CATTGTTGTCACCC-1
#> 0.5205269 0.5215301 0.5237750 0.5292047
#> ACAGTGTGGGTGAG-1 CCAGCGGATCCTAT-1 ATATACGACCTCCA-1 ATTCTTCTAGAAGT-1
#> 0.5300332 0.5313788 0.5317262 0.5323156
#> GTGATCGAGTCTGA-1 ACCACAGACCTTGC-1 CTATGTACTTCTAC-1 TTCCCACTTTGAGC-1
#> 0.5335802 0.5349248 0.5407381 0.5413669
#> CCAGTGCTGGTGAG-1 GACTACGATCTGGA-1 TGCAAGTGCCGAAT-1 TGTGACGAATGCCA-1
#> 0.5414521 0.5436474 0.5446657 0.5475028
#>
#>
#> $`sample-1`[[2]]$`Cluster-2-dist2`
#> $`sample-1`[[2]]$`Cluster-2-dist2`[[1]]
#> TACAAATGTCAGTG-1 AAGATGGAACCACA-1 CGCTACTGAAGAAC-1 ACTCCTCTCCACAA-1
#> 0.5219750 0.5337952 0.5345218 0.5494597
#> CCAGCGGATCCTAT-1 ACTCGAGAACGGGA-1 TGGTCAGATCCAAG-1 GCCCAGGATTTCTG-1
#> 0.5516277 0.5564354 0.5591036 0.5592527
#> GGCGCATGGGGAGT-1 ACCCGTTGGCTTCC-1 CACTGCACCTCCAC-1 GCCACGGACATGAC-1
#> 0.5600749 0.5606460 0.5631716 0.5635609
#> TAGAATTGCCGCTT-1 CCAAGTGATGACTG-1 ACGAGGGAGTTGTG-1 ACCACAGACCTTGC-1
#> 0.5669398 0.5680507 0.5707782 0.5727053
#> CTGAAGTGGGTTTG-1 TACGGAACTGGCAT-1 GAGTACTGCAAAGA-1 GACTACGATCTGGA-1
#> 0.5733548 0.5739455 0.5755971 0.5761036
#>
#>
#> $`sample-1`[[2]]$`Cluster-3-dist2`
#> $`sample-1`[[2]]$`Cluster-3-dist2`[[1]]
#> TGACACGACTGACA-1 ACTCCTCTCCACAA-1 AGCTTTACTTACCT-1 CTTACATGTGGGAG-1
#> 0.4404934 0.4432893 0.4518118 0.4541242
#> CATTGTTGTCACCC-1 ACGCCGGACAGCTA-1 CTTGAGGATCAGAC-1 CTCTAAACAGGAGC-1
#> 0.4559921 0.4611345 0.4675702 0.4702524
#> ATATACGACCTCCA-1 CCCGGAGATTGAGC-1 GGAGAGACCCTAAG-1 AGCGCTCTGAGGCA-1
#> 0.4786793 0.4805195 0.4879885 0.4901373
#> ACTACTACGTGTAC-1 CTGTAACTAGAACA-1 CGTTAACTGGGAGT-1 AGCGATACGCGAGA-1
#> 0.4914950 0.4943729 0.4987184 0.5175823
#> AATTGATGCTAGTG-1 CAGTGATGGGGTGA-1 GCTACGCTTGCCTC-1.1 CGAGAACTCTGTAG-1
#> 0.5256908 0.5275410 0.5360202 0.5434981
#>
#>
#> $`sample-1`[[2]]$`Cluster-4-dist2`
#> $`sample-1`[[2]]$`Cluster-4-dist2`[[1]]
#> GACTACGATCTGGA-1 GACGTAACCGCAAT-1 TAGAATTGCCGCTT-1 CGCTACTGAAGAAC-1
#> 0.4251482 0.4352175 0.4516675 0.4551821
#> CCACTGTGGCGAGA-1 ACTCCTCTCCACAA-1 ACTCGAGAACGGGA-1 AAGATGGAACCACA-1
#> 0.4578682 0.4582179 0.4617831 0.4618111
#> TGAATAACGAATGA-1 GTAATAACTAGACC-1 TTCCCACTTTGAGC-1 CACTGCACCTCCAC-1
#> 0.4634936 0.4661847 0.4718190 0.4722351
#> CTCCATCTATACCG-1 TACAAATGTCAGTG-1 CTTGAGGATCAGAC-1 GCCCAGGATTTCTG-1
#> 0.4730657 0.4787441 0.4791487 0.4798559
#> CCAGTGCTGGTGAG-1 CGAGGCTGATTTCC-1 TAGCCGCTTATCGG-1 GTTATGCTTGGATC-1
#> 0.4803495 0.4816987 0.4824719 0.4825255
#>
#>
#> $`sample-1`[[2]]$`Cluster-5-dist2`
#> $`sample-1`[[2]]$`Cluster-5-dist2`[[1]]
#> ATTCTTCTAGAAGT-1 TGAATAACGAATGA-1 GCGTAAACCTCGAA-1 GCTACGCTTGCCTC-1.1
#> 0.3998998 0.4179401 0.4277619 0.4309251
#> TTCCCACTTTGAGC-1 CCAGTGCTGGTGAG-1 CGAGAACTGGAGGT-1 ACTCGAGAACGGGA-1
#> 0.4360768 0.4364278 0.4457862 0.4464064
#> CGAGGCTGATTTCC-1 GAATGCACCACCAA-1 CCGGAGACAGAGGC-1 AGCGCTCTGAGGCA-1
#> 0.4478324 0.4579576 0.4583528 0.4613972
#> AAGATGGAACCACA-1 AGCTTTACTTACCT-1 GCCACGGACATGAC-1 GTGATCGAGTCTGA-1
#> 0.4626850 0.4637686 0.4708285 0.4725515
#> TGCCCAACGCTACA-1 GACTACGATCTGGA-1 TCGAGCCTTGGTGT-1 CAGTGATGGGGTGA-1
#> 0.4754313 0.4784781 0.4800536 0.4808187
#>
#>
#>
#>
#> $`sample-2`
#> $`sample-2`[[1]]
#> $`sample-2`[[1]]$`Cluster-1-dist1`
#> $`sample-2`[[1]]$`Cluster-1-dist1`[[1]]
#> ACTCGAGACCTGTC-1 CAAGAAGACATACG-1 ACTTGACTAACTGC-1 ATTCAAGACCATGA-1
#> 0.2720574 0.3205915 0.3430173 0.3465420
#> GACAACACCTCTTA-1 GGAGACGAGCTGAT-1 AACTGTCTTCTAGG-1 CCTCATCTGATGAA-1.1
#> 0.4146176 0.4244988 0.4370714 0.5186654
#> ATAGCCGATTTGGG-1 TGGAGACTGTCTTT-1 CGCTACACACACGT-1 CGGTCACTTCACGA-1
#> 0.6815880 0.6853387 0.6874049 0.6942292
#> AAACATTGTTTGTC-1 CTTGTATGGTTTCT-1 ATCACTTGTGTTTC-1 ATGTCACTAACTGC-1
#> 0.7189480 0.7203206 0.7372022 0.7696705
#> AAGTTCCTAGATCC-1 TACGTACTGTCGAT-1 CAAATTGAAGAACA-1 TCTATGTGCGTGTA-1
#> 0.7772963 0.7872017 0.7910273 0.8138759
#>
#>
#> $`sample-2`[[1]]$`Cluster-2-dist1`
#> $`sample-2`[[1]]$`Cluster-2-dist1`[[1]]
#> ACTTTGTGCCTCCA-1 ATTTCGTGAACAGA-1 ACAAATTGAACCAC-1 GGAGGATGGGACTT-1
#> 0.8062220 0.8267056 0.8273775 0.8348757
#> ATCGGAACTACGCA-1 GATCATCTTTCCAT-1 CTGAATCTGCTAAC-1 GGAGTTACTGCCAA-1
#> 0.8371288 0.8420493 0.8571019 0.8590669
#> ATTGCTTGCAAGCT-1 GACAACTGGTCGTA-1 ACAGTGTGGGTGAG-1 ATCTCAACAGAGTA-1
#> 0.8604953 0.8627658 0.8635034 0.8717439
#> TGCTGAGATGAGCT-1 TGTTAAGAGTAGCT-1 AGTTTGCTATCACG-1 GACCATGACTGGAT-1
#> 0.8774194 0.8793628 0.8801783 0.8816786
#> TATCACTGGCATCA-1 CGAGAACTGGAGGT-1 TCATCATGGCGGAA-1 GGCAAGGACCCTAC-1
#> 0.8854787 0.8862833 0.8947336 0.8964509
#>
#>
#> $`sample-2`[[1]]$`Cluster-3-dist1`
#> $`sample-2`[[1]]$`Cluster-3-dist1`[[1]]
#> CGTCCAACGGTTTG-1 CAGCTCACAACGAA-1 CGTGATGAATAAGG-1 GATCATCTTTCCAT-1
#> 0.6353424 0.6588655 0.7114498 0.7298076
#> CGAGAACTGGAGGT-1 GCGCACGAGAGATA-1 GAAGTGCTTCTCAT-1 GGGAAGACCGTAGT-1
#> 0.7302941 0.7671644 0.7738742 0.7772165
#> AAAGATCTGTTGCA-1 GTGTGATGGTTGAC-1 ATTGCACTGGGACA-1 AGCGCTCTGAGGCA-1
#> 0.7854527 0.7914432 0.7919198 0.7923953
#> ACTCAGGATGCTAG-1 AGGTTGTGCCTAAG-1 CCGGAGACAGAGGC-1 TCCACGTGGGAGTG-1
#> 0.7967486 0.8046064 0.8049309 0.8070283
#> GACCATGACTGGAT-1 CCAGTGCTGTGCTA-1 GTGGATTGTGCATG-1 GGAGTTACTGCCAA-1
#> 0.8082819 0.8111021 0.8111046 0.8196229
#>
#>
#> $`sample-2`[[1]]$`Cluster-4-dist1`
#> $`sample-2`[[1]]$`Cluster-4-dist1`[[1]]
#> ACAGTGTGGGTGAG-1 CAAGGTTGAGATCC-1 ACCACAGACCTTGC-1 ACAGACACTTTGGG-1
#> 0.5747485 0.6272156 0.6292295 0.6366617
#> TGTGACGAATGCCA-1 CTTTAGACTGTCAG-1 CCACTGTGGCGAGA-1 CAGACATGACCTCC-1
#> 0.6434184 0.6438520 0.6535688 0.6581712
#> GCAGTTGATCAAGC-1 GCTACGCTTGCCTC-1.1 TACTACACTTGTCT-1 ACTTTGTGCCTCCA-1
#> 0.6715013 0.6764733 0.6866992 0.6911193
#> GACACTGACGTAGT-1 GACAACTGGTCGTA-1 CGAGAACTCTGTAG-1 CGTCCAACGGTTTG-1
#> 0.6995181 0.6998991 0.7030791 0.7035389
#> CGAGGCTGATTTCC-1 ACTACTACGTGTAC-1 TATCACTGGCATCA-1 TATAAGTGGTGTCA-1
#> 0.7193728 0.7252628 0.7270709 0.7277194
#>
#>
#>
#> $`sample-2`[[2]]
#> $`sample-2`[[2]]$`Cluster-1-dist2`
#> $`sample-2`[[2]]$`Cluster-1-dist2`[[1]]
#> CAATTCTGGTCAAC-1 CGTGTAGAAGACTC-1 TCCCGAACACGGAG-1 GCCTACACGGTCAT-1
#> 0.4268877 0.5122497 0.5140131 0.5249173
#> GGCGACTGCTCCAC-1 GTAGCAACCACTTT-1 CTCCATCTCCTAAG-1 GTCAATCTGGCAAG-1
#> 0.5303750 0.5305595 0.5364657 0.5459833
#> CGAGAACTGTTTGG-1 AGCCTCTGGTACGT-1 GTGGATTGGCCAAT-1 TTCTTACTGGTACT-1
#> 0.5809843 0.5814966 0.5827208 0.6055539
#> CTCGCATGAGAATG-1 GTAAGCTGTGTCTT-1 TCAATAGAAGTAGA-1 GGCCAGACTTCCAT-1
#> 0.6057463 0.6153616 0.6313984 0.6577433
#> GTAGCCCTACCTTT-1 TGCAAGACCTCCCA-1 GCGATATGCTCATT-1 AGATATACGCGGAA-1
#> 0.6609702 0.6619806 0.6641168 0.6679245
#>
#>
#> $`sample-2`[[2]]$`Cluster-2-dist2`
#> $`sample-2`[[2]]$`Cluster-2-dist2`[[1]]
#> TACGACGAAGCCAT-1 CGACTGCTGGACGA-1 TTCTTACTGGTACT-1 ACCCAGCTGAGGAC-1
#> 0.7951862 0.8126720 0.8146142 0.8148469
#> AGTTCTACATTCTC-1 GGCCGAACAATCGC-1 CATCATACGGACAG-1 GGTACAACGACTAC-1
#> 0.8169812 0.8216883 0.8239391 0.8283370
#> GGATTGTGGAGGGT-1 TGTTACTGAGATGA-1 CGGACCGACTCCAC-1 ATACGGACAGCTAC-1
#> 0.8293670 0.8317821 0.8333292 0.8333561
#> AGAGAATGTGACAC-1 ATTGCTTGCGGTAT-1 GTATCACTTCATTC-1 AGTATAACCAGTTG-1
#> 0.8351760 0.8371530 0.8388341 0.8414956
#> GAGATAGACGCAAT-1 TTGTCATGTGCACA-1 GGATTTCTGACGAG-1 ATCTTGACCGCCTT-1
#> 0.8420345 0.8420345 0.8426105 0.8430965
#>
#>
#> $`sample-2`[[2]]$`Cluster-3-dist2`
#> $`sample-2`[[2]]$`Cluster-3-dist2`[[1]]
#> AGCGAACTGTACAC-1 TAATCGCTGGGTGA-1 ACTCCCGATACTCT-1 TATGAATGATGTCG-1
#> 0.6672200 0.6713036 0.6853796 0.6872885
#> ATGATATGAAGAGT-1 AGTTTAGATCTCGC-1 GATTTAGAATCTTC-1 TCGCACTGCTGACA-1
#> 0.7001162 0.7034074 0.7054610 0.7058255
#> GGCCGAACGTGCAT-1 TAGATCCTAGTACC-1 TAGGTTCTCAGTTG-1 ACAGTTCTTACGCA-1
#> 0.7104648 0.7119194 0.7119399 0.7173488
#> ACTTAAGATCAGAC-1 GCCACGGACATGAC-1 CATCCCGACACTCC-1 GAGTGACTTGGAGG-1
#> 0.7188141 0.7191639 0.7193662 0.7203257
#> GTAATAACTAGACC-1 ATTCTTCTAGAAGT-1 GTTATGCTTGGATC-1 CACCGTACCTGATG-1
#> 0.7235182 0.7302403 0.7337376 0.7349482
#>
#>
#> $`sample-2`[[2]]$`Cluster-4-dist2`
#> $`sample-2`[[2]]$`Cluster-4-dist2`[[1]]
#> TTCAGTACCCTTAT-1 ATTCTTCTAGAAGT-1 GGATGTTGAGCACT-1 AGTTCTACGAGGTG-1
#> 0.5108015 0.5243684 0.5301985 0.5324557
#> ATACGGACAGCTAC-1 TGTTACTGAGATGA-1 TGAATAACGAATGA-1 ACCTGAGACCTATT-1
#> 0.5331417 0.5365981 0.5662472 0.5707880
#> CGACGTCTACAGCT-1 CGCATAGACTACTT-1 CGAAGACTACCATG-1 GGATTGTGGAGGGT-1
#> 0.5712202 0.5732817 0.5797302 0.5860055
#> TTCCCACTTTGAGC-1 CGTGCACTACGGTT-1 TATACGCTCGTGAT-1 GTATCACTTCATTC-1
#> 0.5868472 0.5878540 0.5881835 0.5933831
#> TGCAAGACCCCAAA-1 ATGATATGAAGAGT-1 AATCTAGACTACCC-1 TAGTCACTCGTTAG-1
#> 0.5934808 0.5944956 0.5945965 0.5969122
#>
#>
#>
#>
#> $`sample-3`
#> $`sample-3`[[1]]
#> $`sample-3`[[1]]$`Cluster-1-dist1`
#> $`sample-3`[[1]]$`Cluster-1-dist1`[[1]]
#> ACCCAAGATTAGGC-1 GAGTACTGCAAAGA-1 GTAGCATGTGTCTT-1 ACTTAAGAACTGTG-1
#> 0.5188665 0.5480534 0.5490973 0.5607969
#> GAAGAATGGCTTCC-1 GAGGGATGCCATAG-1 GAGTGACTTGGAGG-1 AAGAAGACGTGTCA-1
#> 0.5623195 0.5628841 0.5716142 0.5757672
#> ATTTCTCTTGCCCT-1 AGTACTCTAGTCGT-1 GCCTACACTTTGGG-1 CCAGCGGATCCTAT-1
#> 0.5871152 0.5878080 0.5879343 0.5897171
#> CTCGACTGATTTCC-1 GCCCAGGATTTCTG-1 GGACCCGAATGCTG-1 AAATACTGCTTGTT-1
#> 0.5904493 0.5909479 0.5912867 0.5939080
#> GTTAAAACGGAAAT-1 GTGACAACTACGAC-1 CTATGTACTTCTAC-1 TTGTAGCTGATAAG-1
#> 0.5972331 0.5979124 0.5994133 0.5999087
#>
#>
#> $`sample-3`[[1]]$`Cluster-2-dist1`
#> $`sample-3`[[1]]$`Cluster-2-dist1`[[1]]
#> ATATACGACCTCCA-1 TAAGAACTTAGAGA-1 CCAGCGGATCCTAT-1 GAATGCACCACCAA-1
#> 0.4582329 0.4718779 0.4933438 0.4994470
#> AGCGAACTTGTAGC-1 AGGATAGACCGAAT-1 GGAGGATGAGCTAC-1 CAAGGTTGAACCGT-1
#> 0.4996848 0.5015787 0.5029141 0.5044784
#> CATTGTTGTCACCC-1 ACGCTGCTCAGCTA-1 CTCCATCTATACCG-1 GACCTAGACCTAAG-1
#> 0.5049082 0.5147647 0.5149352 0.5183054
#> GAGTGACTTGGAGG-1 GCAGCCGAGTCTGA-1 GTCGACCTACCTGA-1 ACTTAAGAACTGTG-1
#> 0.5244204 0.5285276 0.5297468 0.5336752
#> GATAATACTGGCAT-1 CTCTAATGTGGGAG-1 GTGGATTGTCTTAC-1 GAGTACTGCAAAGA-1
#> 0.5390897 0.5411767 0.5419274 0.5422313
#>
#>
#> $`sample-3`[[1]]$`Cluster-3-dist1`
#> $`sample-3`[[1]]$`Cluster-3-dist1`[[1]]
#> TTAACCACGCATAC-1 GTTACGGAGGTGAG-1 CGCTACTGAAGAAC-1 TACAAATGTCAGTG-1
#> 0.6774819 0.6915117 0.7271765 0.7307254
#> CGCCATTGCTACGA-1 CATCCCGATTCGCC-1 GCAGCCGAGTCTGA-1 CGTGCACTTGACAC-1
#> 0.7311125 0.7421082 0.7483895 0.7519949
#> GGAGCCACGCATCA-1 GCGAAGGAGTAAAG-1 ACGACAACTTCTTG-1 ATTCTGACCTAGAC-1
#> 0.7526287 0.7601791 0.7624755 0.7648011
#> GTAATAACTAGACC-1 CTAACTACAAGAAC-1 ATGTAAACGAGCAG-1 GCATGTGACGTGTA-1
#> 0.7656720 0.7717603 0.7766987 0.7774167
#> TCTACAACTGGTGT-1 TGTGGATGTCTCTA-1 TCCTAATGTAGTCG-1 GGACTATGCCGCTT-1
#> 0.7778520 0.7825989 0.7838049 0.7856336
#>
#>
#> $`sample-3`[[1]]$`Cluster-4-dist1`
#> $`sample-3`[[1]]$`Cluster-4-dist1`[[1]]
#> CTCGACTGATTTCC-1 ATTCTTCTAGAAGT-1 AAGATGGAACCACA-1 TTCCCACTTTGAGC-1
#> 0.5133656 0.5197666 0.5221534 0.5330723
#> CAGTGATGGGGTGA-1 TGCAAGTGCCGAAT-1 GACTACGATCTGGA-1 ACTCGAGAACGGGA-1
#> 0.5331206 0.5470221 0.5475329 0.5502270
#> AGCGAACTTGTAGC-1 CTCCATCTATACCG-1 GCCACGGACATGAC-1 GAATGCACCACCAA-1
#> 0.5519753 0.5527183 0.5533464 0.5579289
#> TCGAGCCTTGGTGT-1 GTTATGCTTGGATC-1 GTAGGTACGTTGAC-1 GAGTACTGCAAAGA-1
#> 0.5592937 0.5635569 0.5698735 0.5712583
#> ACGCTGCTCAGCTA-1 TATGTGCTAGTGTC-1 GACGTAACCGCAAT-1 GCCCAGGATTTCTG-1
#> 0.5748533 0.5761488 0.5774108 0.5777036
#>
#>
#> $`sample-3`[[1]]$`Cluster-5-dist1`
#> $`sample-3`[[1]]$`Cluster-5-dist1`[[1]]
#> ACTCCCGAGTGTCA-1 GTGGATTGTCTTAC-1 TGAATAACGAATGA-1 GCTATACTCATGCA-1
#> 0.5383948 0.5813815 0.5820160 0.5941744
#> ACGCCGGACAGCTA-1 CCAGCGGATCCTAT-1 AACACTCTACTAGC-1 CTTGAGGATCAGAC-1
#> 0.5970663 0.6149323 0.6178011 0.6214520
#> AACAATACCCCTAC-1 AGCGAACTTGTAGC-1 TTCCAAACGATGAA-1 ACTCCTCTCCACAA-1
#> 0.6231395 0.6301978 0.6337673 0.6342416
#> AGCGATACGCGAGA-1 CTAACTACAAGAAC-1 ACTTGACTCGCTAA-1 TGAATAACCCAACA-1
#> 0.6378634 0.6420228 0.6421799 0.6424283
#> CTGTAACTAGAACA-1 TGACCGCTAGTCAC-1 GAATGCACCACCAA-1 TAATGATGCGCAAT-1
#> 0.6433933 0.6543339 0.6573612 0.6580093
#>
#>
#>
#> $`sample-3`[[2]]
#> $`sample-3`[[2]]$`Cluster-1-dist2`
#> $`sample-3`[[2]]$`Cluster-1-dist2`[[1]]
#> GAAGGTCTTTGACG-1 TGAACCGATCACGA-1 ATTAACGATCCAAG-1 GCAGTTGATCAAGC-1
#> 0.5356463 0.5700782 0.5703599 0.5736609
#> TTCAGACTGTCTGA-1 GTATTCACCAGGAG-1 GAAACAGATTCATC-1 TGTGACGAATGCCA-1
#> 0.5736657 0.5830493 0.5927145 0.5946173
#> ACTTGACTCACCAA-1 GTATCACTTCATTC-1 CGCACTTGATTCTC-1 TGACGCCTACACCA-1
#> 0.5982439 0.6013820 0.6047366 0.6058019
#> ACCCACTGACACGT-1 CGAAGACTACCATG-1 TAACCGGACAGTCA-1 TAGGTCGAACCCTC-1
#> 0.6101928 0.6107579 0.6144317 0.6145092
#> CCCTGAACGAACTC-1 ACCACAGACCTTGC-1 TTTCGAACACCCAA-1 ACCTGAGACCTATT-1
#> 0.6150798 0.6155167 0.6156981 0.6170923
#>
#>
#> $`sample-3`[[2]]$`Cluster-2-dist2`
#> $`sample-3`[[2]]$`Cluster-2-dist2`[[1]]
#> TACTCTGAGTCTTT-1 CTTAGACTCTGTTT-1 ACCGAAACTGACCA-1 TGTAAAACGGTAGG-1
#> 0.4739577 0.4776483 0.4864887 0.4951033
#> TCGGCACTCCAAGT-1 GCCAACCTTTTCAC-1 CGGATAACCACAAC-1 CACCGTACCTGATG-1
#> 0.4973338 0.4986628 0.5048768 0.5128501
#> TCATGTACTGCTGA-1 GTCCCATGCTCAGA-1 CGTGATGAATAAGG-1 ACACGTGAAGTCAC-1
#> 0.5141681 0.5142934 0.5211514 0.5231725
#> AGAGCGGAGTCCTC-1 TGTCAGGAATGCTG-1 AAACGGCTTGTCAG-1 AACCACGAATTTCC-1
#> 0.5232360 0.5246671 0.5255635 0.5278311
#> ACTTCCCTTTTCGT-1 CGTCCATGCAGAAA-1 TTTCGAACACCCAA-1 TGACGCCTACACCA-1
#> 0.5299772 0.5338010 0.5339434 0.5354578
#>
#>
#> $`sample-3`[[2]]$`Cluster-3-dist2`
#> $`sample-3`[[2]]$`Cluster-3-dist2`[[1]]
#> ACTTGACTCACCAA-1 AGCGGCTGCCGTTC-1 CGTACCACCTGCTC-1 TCGCACTGCTGACA-1
#> 0.7415713 0.8042380 0.8051522 0.8110260
#> CATAGTCTGACGAG-1 CCAGTGCTGGTGAG-1 ATGCGCCTCCCACT-1 TACGGAACTGGCAT-1
#> 0.8118001 0.8231643 0.8236726 0.8236941
#> CACCGTACCTGATG-1 CGAAGACTACCATG-1 TAGTCACTCGTTAG-1 CTACGCACTACGAC-1
#> 0.8248783 0.8269987 0.8290155 0.8290773
#> CATACTACAACGAA-1 TAACCGGAACCCTC-1 AGGGTTTGAACCAC-1 CCGGAGACAGAGGC-1
#> 0.8317504 0.8339239 0.8360113 0.8370452
#> ATGTCACTGGTACT-1 TCGCAAGAATTCTC-1 ACAAGAGATCGACA-1 CGTTAACTGGGAGT-1
#> 0.8400257 0.8427462 0.8449216 0.8457391
#>
#>
#> $`sample-3`[[2]]$`Cluster-4-dist2`
#> $`sample-3`[[2]]$`Cluster-4-dist2`[[1]]
#> TGTGACGAATGCCA-1 ACCTGAGACCTATT-1 TACGCAGAGCCCTT-1 CCGGAGACAGAGGC-1
#> 0.4642844 0.4658289 0.4868201 0.4873037
#> CCAGTGCTGGTGAG-1 CGAGGCTGATTTCC-1 CAATATGATGGTGT-1 ATACGGACAGCTAC-1
#> 0.4915663 0.4928963 0.5047070 0.5073031
#> CGAGAACTGGAGGT-1 AGCGGCTGCCGTTC-1 TCGCACTGCTGACA-1 AATCTCTGGCCCTT-1
#> 0.5087385 0.5087486 0.5220418 0.5246607
#> TACTCTGAGTCTTT-1 TAACCGGACAGTCA-1 AATCTAGACTACCC-1 ACTTCCCTTTTCGT-1
#> 0.5250308 0.5261223 0.5270697 0.5273376
#> TGCAAGACCCCAAA-1 GTATTCACCAGGAG-1 TAGTCACTCGTTAG-1 CTGCAGCTTCTTAC-1
#> 0.5285829 0.5288249 0.5291874 0.5324764
#>
#>
#> $`sample-3`[[2]]$`Cluster-5-dist2`
#> $`sample-3`[[2]]$`Cluster-5-dist2`[[1]]
#> CGGTCACTTACAGC-1 AATCTCTGCGAATC-1 AAGATTACCCCACT-1 CACCGTACCTGATG-1
#> 0.4859089 0.5079568 0.5124337 0.5287385
#> TAACCGGAACCCTC-1 CCCGGAGATTGAGC-1 TAAGCGTGCGATAC-1 CTATGACTGTGTAC-1
#> 0.5303050 0.5501528 0.5529128 0.5541263
#> TATAAGTGGTGTCA-1 GCGCACGAGAGATA-1 GCTACGCTTGCCTC-1.1 ATTGAAACATCACG-1
#> 0.5548599 0.5587877 0.5589549 0.5595663
#> CGGATAACCACAAC-1 CCAGCACTCCATGA-1 AGCGCTCTGAGGCA-1 TAGAGCACCCTTTA-1
#> 0.5615023 0.5627303 0.5722292 0.5736845
#> CTATTGTGGGTACT-1 TTCTACGACTGTAG-1 CTTACATGTGGGAG-1 TAATCCACCTCAGA-1
#> 0.5739826 0.5756303 0.5794227 0.5797350
#>
#>
#>
#>