Package index • SCIntRuler

`SCIntRuler-package` `SCIntRuler`	SCIntRuler: Integration of Single-Cell RNA-seq Datasets
`CalcuSCIR()`	Calculate SCIntRuler
`crossdist()`	Cross-Distance Matrix Calculation
`FindCell()`	Find cells indicating shared biological features across conditions
`FindNNDist()`	Find the nearest neighbors
`FindNNDistC()`	Find the nearest neighbors
`GetCluster()`	Get broad and fine clusters
`NormData()`	Normalized RNA data matrix
`PermTest()`	Permutation Test
`PlotSCIR()`	Plot SCIntRuler
`SCEtoSeurat()`	Input and Split SingleCellExperiment Data
`sim_data_sce`	My Example Dataset
`sim_result`	My Example Dataset
`SummCluster()`	Get maximum number of broad clusters

Reference